Which of the following is untrue about Prediction Using Discriminant Analysis for Gene Prediction?

QDA draws a curved line based on a quadratic function

LDA works by drawing a diagonal line that best separates coding signals from noncoding signals based on knowledge learned from training data sets of known gene structures

Some gene prediction algorithms rely on discriminant analysis, either LDA or quadratic discriminant analysis (QDA), to improve accuracy

LDA works by plotting a three-dimensional graph of coding signals versus all potential 3 splice site positions

Which of the following is untrue about Prediction Using Neural Networks for Gene Prediction?

The output is the probability of an exon structure

A neural network is constructed with multiple layers; the input, output, and hidden layers

The input is the gene sequence with intron and exon signals

The model is not fed with a sequence of known gene structure

The output is the probability of an exon structure

Which of the following is untrue about Ab Initio Based Programs for Gene Prediction?

The goal of the ab initio gene prediction programs is to discriminate exons from noncoding sequences

The goal is joining exons together in the correct order

The main difficulty is correct identification of exons

To predict exons, the algorithms rely solely on gene signals

Explore topic-wise MCQs in Bioinformatics.

This section includes 6 Mcqs, each offering curated multiple-choice questions to sharpen your Bioinformatics knowledge and support exam preparation. Choose a topic below to get started.

1.	Which of the following is untrue about Prediction Using Discriminant Analysis for Gene Prediction?
A.	QDA draws a curved line based on a quadratic function
B.	LDA works by drawing a diagonal line that best separates coding signals from noncoding signals based on knowledge learned from training data sets of known gene structures
C.	Some gene prediction algorithms rely on discriminant analysis, either LDA or quadratic discriminant analysis (QDA), to improve accuracy
D.	LDA works by plotting a three-dimensional graph of coding signals versus all potential 3 splice site positions
Answer» E.

Discussion

2.	GRAIL is a web-based program that is based on a neural network algorithm Which is trained on several statistical features such as splice junctions, start and stop codons, poly-A sites, promoters, and CpG islands.
A.	True
B.	False
Answer» B. False

Discussion

3.	Which of the following is untrue about Prediction Using Neural Networks for Gene Prediction?
A.	A neural network is constructed with multiple layers; the input, output, and hidden layers
B.	The input is the gene sequence with intron and exon signals
C.	The model is not fed with a sequence of known gene structure
D.	The output is the probability of an exon structure
Answer» D. The output is the probability of an exon structure

Discussion

4.	In Ab Initio Based Programs for Gene Prediction Gene content refers to coding statistics, which includes nonrandom nucleotide distribution, amino acid distribution, synonymous codon usage, and hexamer frequencies.
A.	True
B.	False
Answer» B. False

Discussion

5.	Which of the following is untrue about Ab Initio Based Programs for Gene Prediction?
A.	The goal of the ab initio gene prediction programs is to discriminate exons from noncoding sequences
B.	The goal is joining exons together in the correct order
C.	The main difficulty is correct identification of exons
D.	To predict exons, the algorithms rely solely on gene signals
Answer» E.

Discussion

6.	Most vertebrate genes use __________ as the translation start codon and have a uniquely conserved flanking sequence call a Kozak sequence (CCGCCATGG).
A.	AAG
B.	ATG
C.	AUG
D.	AGG
Answer» C. AUG

Discussion

Explore topic-wise MCQs in Bioinformatics.

Which of the following is untrue about Prediction Using Discriminant Analysis for Gene Prediction?

GRAIL is a web-based program that is based on a neural network algorithm Which is trained on several statistical features such as splice junctions, start and stop codons, poly-A sites, promoters, and CpG islands.

Which of the following is untrue about Prediction Using Neural Networks for Gene Prediction?

In Ab Initio Based Programs for Gene Prediction Gene content refers to coding statistics, which includes nonrandom nucleotide distribution, amino acid distribution, synonymous codon usage, and hexamer frequencies.

Which of the following is untrue about Ab Initio Based Programs for Gene Prediction?

Most vertebrate genes use __________ as the translation start codon and have a uniquely conserved flanking sequence call a Kozak sequence (CCGCCATGG).