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This section includes 3 Mcqs, each offering curated multiple-choice questions to sharpen your Bioinformatics knowledge and support exam preparation. Choose a topic below to get started.
1. |
Minimum evolution (ME) constructs a tree with a similar procedure, but uses a different optimality criterion that finds a tree among all possible trees with a minimum overall branch length. The optimality criterion relies on the formula S = bi where bi is the (i)th branch length. |
A. | True |
B. | False |
Answer» B. False | |
2. |
Which of the following is untrue about the Fitch Margoliash? |
A. | Method selects a best tree among all possible trees based on minimal deviation between the distances calculated in the overall branches in the tree and the distances in the original dataset |
B. | It starts by randomly clustering two taxa in a node |
C. | It starts by creating three equations to describe the distances |
D. | The method searches for some specific tree topologies |
Answer» E. | |
3. |
Corrects for unequal evolutionary rates between sequences by using a conversion step. This conversion requires the calculations of r-values and transformed r-values using the following formula ______ |
A. | d<sub>AB</sub> = d<sub>AB</sub> 1/4 (r<sub>A</sub> + r<sub>B</sub>) |
B. | d<sub>AB</sub> = d<sub>AB</sub> 1/2 (r<sub>A</sub> + r<sub>B</sub>) |
C. | d<sub>AB</sub> = d<sub>AB</sub> 1/3 (r<sub>A</sub> + r<sub>B</sub>) |
D. | d<sub>AB</sub> = (d<sub>AB</sub>/3) 1/2 (r<sub>A</sub> + r<sub>B</sub>) |
Answer» C. d<sub>AB</sub> = d<sub>AB</sub> 1/3 (r<sub>A</sub> + r<sub>B</sub>) | |